ggsegverse

Gross Geometry Brain Segmentation Universe for R

Get Started Browse Atlases

library(ggseg)
library(ggplot2)

ggplot() +
  geom_brain(
    atlas = dk(),
    aes(fill = region),
    position = position_brain(hemi ~ view),
    show.legend = FALSE
  ) +
  theme_void()

2D brain atlas showing the Desikan-Killiany parcellation

Quick Install

# Install from R-universe
install.packages(
 c("ggseg", "ggseg3d", "ggseg.extra"),
 repos = c(
   "https://ggseg.r-universe.dev",
   "https://cloud.r-project.org"
  )
)

Core Packages

The ggsegverse provides tools for visualizing brain atlas data in R. Built on top of ggplot2 and Three.js.

Atlas Packages

The ggsegverse ecosystem includes atlas packages providing data for different brain parcellations.

View All Packages

Latest News

The cerebellum enters the chat

For six years, ggseg has been the cortex-and-subcortex show. You could plot Desikan-Killiany parcellations, subcortical structures, even white matter tracts — but the…

Athanasia M. Mowinckel

Community

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Discussions

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Issue Tracker

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Want to Contribute?

There are many ways to help grow the ggsegverse.

Atlas Wishlist

Browse requested brain atlases and help implement one

Open Issues

Find issues to work on across the ggsegverse

Contributing Guide

How to contribute code, atlases, or documentation