ggsegverse

Gross Geometry Brain Segmentation Universe for R

Get Started Browse Atlases

library(ggseg)
library(ggplot2)

ggplot() +
  geom_brain(
    atlas = dk(),
    aes(fill = region),
    position = position_brain(hemi ~ view),
    show.legend = FALSE
  ) +
  theme_void()

2D brain atlas showing the Desikan-Killiany parcellation

Quick Install

# Install from R-universe
install.packages(
 c("ggseg", "ggseg3d", "ggseg.extra"),
 repos = c(
   "https://ggseg.r-universe.dev",
   "https://cloud.r-project.org"
  )
)

Core Packages

The ggsegverse provides tools for visualizing brain atlas data in R. Built on top of ggplot2 and Three.js.

Atlas Packages

The ggsegverse ecosystem includes atlas packages providing data for different brain parcellations.

View All Packages

Latest News

sf is now optional: ggseg installs (almost) anywhere

If you’ve ever tried to install ggseg and watched it fall over with a wall of red about GDAL, GEOS, or PROJ, this post is for you.

Athanasia M. Mowinckel

Community

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Discussions

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Issue Tracker

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Want to Contribute?

There are many ways to help grow the ggsegverse.

Atlas Wishlist

Browse requested brain atlases and help implement one

Open Issues

Find issues to work on across the ggsegverse

Contributing Guide

How to contribute code, atlases, or documentation